Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIIKFVLLLPTILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGNISGTAVALKTGGPG--SILWMAIIVIITSVIKYVTCYLSIKNRKKKNGRFIGGPMAYMVDAFNSRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMINVPVVTGGIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGI--ILFKFSENILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLITIISPFIVAFIVFITTMVLLVTDSWVTGLESTNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
| 4MFL Chain:A ((23-345)) | MD---------PETVRIALGLEERTAAWLTELDELGPPAEPVRLPRGEEARDLLRRL--------EVPELDAEEIVAAAPDPDRDPALWWLLERTHHAIVR---------HMGDHRAKPRGGPPL----PYEGGAAARYFHVYVFLATVPAVRRFHAER--------GIPDEVGWETLTQLGELVAIHRRKYGQ-------GGMNMQWWTTYHLRGILYRLG--------RLQFSLATGKDGTPHLGLA-------VPEWG-------------------GPLLPKAYDESLHRARPFFDRHFPEHGARVAWGSSWML---DPQLEEYLTEDSNIIQLAR--FWTLTD------------------------SAPEPGNADGDSSILEFVFRY-----NGQPLDELPQRSSLERAVIAHLK-----------------AGRHWHM------------RTGFVKLP- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -306951 for 2513 contacts (-122.1/contact) +
2D Compatibility (PS) -32625 + (NN) -2529 + (LL) 13180
1D Compatibility (HY) -3200 + (ID) 2400
Total energy: -334525.0 ( -133.12 by residue)
QMean score : 0.221
|
|
|