Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKVIASHSNGQEPEGEELNYRKTHEALERWKEKWPSNYKRINKVNASSSTEQGKTGKMGVQTDEKTVNYLMRKTNISEQNSQIQTRFLLIDQENQEVRLALLHSYQPPK
2K52 Chain:A ((49-74))
--------------------------------------------------------------------------------GDEIIVQAIDVRPEKREIDFKYIPLE----
General information:
TITO was launched using:
RESULT:
Template:
2K52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5513 for 91 contacts (-60.6/contact) +
2D Compatibility (PS) -2688 + (NN) -56 + (LL) 4588
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -5419.0 ( -59.55 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2K52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K52-query.scw
PDB file :
Tito_Scwrl_2K52.pdb
: