Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWMAGMLYLPRLYVYHATVKPGSESDSLLQTMERRFLRYIINPAMLF-SLSFGIALMIIREAYREGWFHVKAL--ALFFMFGIHGLLAMHRKKFAMGSNEKNHVYFRVLNEMVTVLIIIIVIMIVVKPF
1HIW Chain:A ((8-122))
VLSGGELDKWE-KIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQNKSKKKAQQAAAD-------------
General information:
TITO was launched using:
RESULT:
Template:
1HIW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80964 for 744 contacts (-108.8/contact) +
2D Compatibility (PS) -11266 + (NN) -2759 + (LL) 2240
1D Compatibility (HY) 2400 + (ID) 750
Total energy: -91099.0 ( -122.44 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_1HIW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HIW-query.scw
PDB file :
Tito_Scwrl_1HIW.pdb
: