Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITLNNLNCCTKFGIELEFYTEGIEREHLFLNSVKNKIALLGFSCKKESSTHQYEIKSGCYNDSNNLIKHFDLAKELLTETAQKLGGNTSFKAKPYLDRAGSALNVHVNLVDSNNSNLFYCNEQKY---SDYLIYGIGGLCAMMKEHMSFFAPSDDSYLRFQYPDIHTPTTISWGVNNRTAAIRIPCLGSKC---RLEHRVPGADCNLEKVLIAIIEGITFGIENKIAPPNRVYGIASDPQYKMENLV |
4ACF Chain:A ((252-405)) | ------------------------------------------------------------------------LYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLW-KDGAPLMY-DETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRL-VPGYEAPINLVYSQRNRSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEEAASI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ACF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78084 for 1060 contacts (-73.7/contact) +
2D Compatibility (PS) -15410 + (NN) -6074 + (LL) 4524
1D Compatibility (HY) -5600 + (ID) 2500
Total energy: -103144.0 ( -97.31 by residue)
QMean score : 0.441
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