Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHKIKKRKLSRCTEHRLSMLKNLSISLINHEQIITTLPKAKELRPYVEKFITIAKNKNTLHGRRLLLSRLHNNKLVVDKLLNVLASRYQGCKGGYSRVMKFSTRKGDCASMAVIELVNRDVTAKGKVCDKNKEKNEVATKS
2ZJQ Chain:K ((3-115))
--HGKAGRKLNRNSSARVALARAQATALLREGRIQTTLTKAKELRPFVEQLITTAKGGD-LHSRRLVAQDIH-DKDVVRKVMDEVAPKYAERPGGYTRILRVGTRRGDGVTMALIEL-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55333 for 757 contacts (-73.1/contact) +
2D Compatibility (PS) -12202 + (NN) -3932 + (LL) 1560
1D Compatibility (HY) -7200 + (ID) 2450
Total energy: -79557.0 ( -105.10 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJQ-query.scw
PDB file :
Tito_Scwrl_2ZJQ.pdb
: