Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIVLATG----GTGGHIFPAITLARAIKRQGYDSILFADKKTGK-N---TD--V-KDYTLPLNKPGGNKFRFFLLLIYSCVLALYQIRKLKPKLVIGFGGYASFPTLLAAKVLS-IPIILHEQNAVLG--------RVNKFFFNSAELIATSFPETKYAK------GNKCVFIGNFVDIKAKSHS-------------STKKILTVLIIAGSQGANFFDDVVSSVICNLPIEIRKKIRVVQQCMKKN-MNKVEGLYKGGQVICELSEFF--DDMGSRLTDAHLVISRAG-----------ATSIAEITLARRPAIYIPYPCSKDDHQFYNAEYIKDSGAAVVVEQNSEVKKNLTKLLVNLLGDSQKLRDMANNTKKIRI-KNGVTEFIRIVIHKLG |
| 3OKP Chain:A ((5-376)) | RKTLVVTNDFPPRIGGIQSYLRDFIATQD--PESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSV-----M---LPTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQD-SLIKAMPQVIAA-RPDAQL-LIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG--------APETVTP-ATGLVVEGSD--VDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205623 for 2611 contacts (-78.8/contact) +
2D Compatibility (PS) -33625 + (NN) -11097 + (LL) 944
1D Compatibility (HY) 5200 + (ID) 2100
Total energy: -246301.0 ( -94.33 by residue)
QMean score : 0.473
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