Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPKTFEGFHIYHYEEVSSTNGKA-LDLIDRGISNETVIIADKQTEGRGRTGKNWISPEGNFYASFIINLLQITSLGSSITHWDSRLAVAAHLDVIPAHDAKIQCWNDRESLSKLTELTFVTALAVGNTLLSFINDSNVQYKWPNDIFVDGKKISGILLEKKSNSNWLVIGIGINIDHAPLLEATCINKLLSSSVVPVTDTKIQMQVPMSHARMILQNIYILKELVTNFNNLRKQWI---LDGFCAIREMWLKRAFKMNEQISVK-FASKLHEGIFIDIDKGGRLVLQQKDGS---LIYFDAGELFVNNIL |
| 2DZC Chain:A ((10-235)) | -------GRRVIYFQEITSTNEFAKTSYLEEG----TVIVADKQTMG---------SPEGGLWLSIVLS------------------------PKVPQKD--------------LPKIVFLGAVGVVETLKEFSIDGRI--KWPNDVLVNYKKIAGVLVE--GDK--IVLGIGLNVNNKVPNGATSMKLELGS------------EVPL---------LSVFRSLITNLDRLYLNFLKNPMDILNLVRD-------NMILGVRVKILG--SFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121049 for 1618 contacts (-74.8/contact) +
2D Compatibility (PS) -21619 + (NN) -7635 + (LL) 7592
1D Compatibility (HY) -20800 + (ID) 3850
Total energy: -167361.0 ( -103.44 by residue)
QMean score : 0.410
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