Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNIKLYYSSYLRYNIRSSLYIPFKPNILVKLDILKNEVLSLKTVSPEKVVEVSNLID-KFRLKILTDFQNFEKQWFQEFKNTWKQKLMPNMRSEYLGLHCTKIY
4JIH Chain:A ((250-298))
---------------------------VLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRACNVLQSSHLEDYPFDAEY---------
General information:
TITO was launched using:
RESULT:
Template:
4JIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19381 for 226 contacts (-85.8/contact) +
2D Compatibility (PS) -4972 + (NN) 480 + (LL) 2472
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -26801.0 ( -118.59 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_4JIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JIH-query.scw
PDB file :
Tito_Scwrl_4JIH.pdb
: