Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLTFKENMFIGSMLFGLFFG-AGNLIFPIHLGQAAGSN-VFIANLGFLITAIGLPFLGIIAIGISKTSGLFEIASRVNKTYAYIFTIALYLVIGPFFALPRLATTSFEIAFSPFLSPKQITLYLFIFSFVFFVIA-WFFARKPSRILEYIGKFLNPVFLVLLAIILLFAFIHPLGGISDAPISKQYQSHALFNGFLDGY-NT--LDALASLAFGIIIVATIKKLGIENPTDIAKETIKSGTISIIMMGIIYTLLAIMGTLSIGHFKLSENGGIALAQITQYYLGNYGIVLLSLIVMVACLKTAIGLITAFSETFEHLFPKMNYLAIATVVSFISFLFANVGLTKIIMYSVPVLMFLYPLAIALIVLTLFSSKF-HHS---KIIYQCTIFFTMIAALVDGLKASPEFISSTSFSQTLINFSQKYLPLSD-IGMGWVVLSLIG-FIIGFIIYKIKHRKIP----- |
| 2YIJ Chain:A ((19-417)) | ----FAKRWRDLSGQNHWK---GMLQPLDQDLREYIIHYGEMAQAGYDTFNINTES-QFAGASI---YSRKDFFAKVGLEIAHPYTKYKVTKFI----------YATSDIHVPESFLLFPISWSKESNW---------MGYVAVTDDQGTALLGR-----RDIVVSWRGSVQPFEFGLVNAIKIFGERNDQVQIHQGWYSIYMSQDERSPFTKTNARDQVLREVGRLLEKY---------KDEEVSITICGH--SLGAALATLSATDIVANGYNRPKSRPDKSC-----------PVTAFVFASPRVG-----DSDFRKLFSGLEDIRVLRTRNLPDVIPIYPP-------------IGYSEVGDEFPIDTRKSPYMKSPGNLATFHCLEGYLHGVAGT-QGTNKADLFRLDVERAIGLVNKSVDGLKDECMVPGKWRVLKNKGMAQQDDGSWELVDHEIDDNEDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -364533 for 3095 contacts (-117.8/contact) +
2D Compatibility (PS) -37427 + (NN) 12706 + (LL) 7452
1D Compatibility (HY) 19600 + (ID) 1650
Total energy: -363852.0 ( -117.56 by residue)
QMean score : 0.175
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