Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFKRLATIFSAVLVLSGCGSMHSSGKDLNISLPLKTKSIAPYETDVPVKIGAAESLFKTNDQGKIEKALVKSY-HQPNDTTLDIELKDNIKFQNGQKL----TAEKVKSSLENSMKKS--DLVKYSLPISSITAKGQKLTIKTNSAYPELVSELA--NPFMAIYYTDAKSDVN----QTPVGTGPYQIKDYKQSRKISLSNFKDYWQGKPKLDHITVTYQEDGNNRVRNLESQKDDLITD----VPVNKVHDIENNQNLKVSKESGFRTSLLMYNHTNKKMTK--SVREALDHIIDRQGIADHIYQGYAKPATSPFNDKIPYIK-EPKLTKQNIEQAKTLLAKDGYT----------KEHPLKIKLITYDGRPELSK-IAQVLQSDAKKANIEIDIKSVDDIEGYLKDRSAWDATMYSFGTIPRGDTGYFFN-QAY--------KKDGAINKGDYNNSNVDDLINQLNHTVDVKERHNISNDIIKLSSRDVPNSYIAYNDQIVAANSKVKNYKVTPEGIYLIDYRTTIER |
| 3MVY Chain:A ((35-487)) | ------------------------------------------------------EPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLK--SAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN-TAKAPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPSQYDPQKAKALLEKAGWTLPAGKDIREKNGQPLRIEL-SFIGTDALSKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDG------RFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAP-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7089 for 3103 contacts (2.3/contact) +
2D Compatibility (PS) -43940 + (NN) -18164 + (LL) 5472
1D Compatibility (HY) -20400 + (ID) 5400
Total energy: -75343.0 ( -24.28 by residue)
QMean score : 0.354
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