Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFKEGIDYAHALDKKVYATINGFPFNSQLKLLEEHLYKMAELEPDAFIIAAP---------GVIKLASKIAP-HIPVHLSTQANVLNTLDAQVFYDLGVKRIVCARELSLNDAVEIKKALPDLELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSGHIAEILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFTDGYLMRRPFERLDTQNHQTAISEGDFQVNGEITEDGRFFACKFTTTTNTAYEIIAPKNAAITPIVNDIGKIYTFEKRSYLVLYKILLENNTELETIHSGNVNLVRLPAPLPAFSFLRTQVRV |
| 3TSM Chain:A ((131-254)) | -----------DPYQVYEARSWGADCILIIMASVD----------DDLAKELEDTAFALGMDALIEVHD---EAEME-------RALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVGESG--IFTHEDCLRLEKSGIGTFLIGESLMRQHDVAAATRALLTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62509 for 823 contacts (-76.0/contact) +
2D Compatibility (PS) -12499 + (NN) -6414 + (LL) 19180
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -65142.0 ( -79.15 by residue)
QMean score : 0.544
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