Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNEVQGIGIPTSHASVQTTPTKEISRTNTINTVDESKTTIDPDQYKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLVVSVKDAN--------GDKVIREIPSKEAVELMQRMRDVIGIIFDKRG
4WHJ Chain:A ((329-396))
------------------------------------------------------QKATEELRRCGADIPSQEADKMFFLIEKIKMFNQDIEKLVEGEEVVRENETRLYNKIREDFKNWVGILATNTQ
General information:
TITO was launched using:
RESULT:
Template:
4WHJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3667 for 230 contacts (15.9/contact) +
2D Compatibility (PS) -6651 + (NN) -3476 + (LL) 2892
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -7568.0 ( -32.90 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_4WHJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WHJ-query.scw
PDB file :
Tito_Scwrl_4WHJ.pdb
: