Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKAIIGKIIGTRNDRWIKQYKKKVLAINALEPTYEKMSDVELQNAFEELKKRVRSVEKDLQEKTLLEVLPESFAITREASKRILKMRHFDVQLIGGMVLNDGKIAEMKTGEGKTLVATLAVALNAMKGESVYVVTVNDYLAHRDSKEMEPLYQFLGYSVGTITA-----------------------SVRDDD--------------------------ERLEIYSKDIVYGTNNEFGFDYLRDNMKYSLEHKVQKSHAFAIVDEVDSILIDEARTPLIISGPVDRRMENYNKADEVAKSMQVEVDFTIDEKNRAILITEEGIKKAENLFGVDNLYKIENAALSHHLDQALKANYLFFIDKDYIVANNEVVIVDEFTGRLSEGRRFSEGLHQALEAKEGVSIKEESQTLADITFQNYFRMFSKLSGMTGTAQTEATEFLEIYNLEVVSIPTNLAIKRKDLNDLIYKSEKEKFDAVILKIKELHDKGQPVLVGTASIEKSETLHALLKKERIPHTVLNAKQHTKEAEIIKDAGLKGAVTIATNMAGRGVDIKLTDEVKELGGLYIIGTERHESRRIDNQLRGRSGRQGDPGVSQFYLSLEDNLLRIFGSDRIKGVMEKLGLKDGEHIESKLVTRAVENAQKKVENLHFESRKHLLEYDDVANEQRKSVYKFRDE-LLDINYDISAK-IAENREYALNQIFSKLKAFDHQNLSEEELL---GLKNILKEDFNASVELEDLEKASPIEKFVAEKLKSDYENKMKALDSEQRSRIERIVYLQILDNAWREHLYTMDNLKTGINLRGYNQKDPLVEYKKESYNLFLELIGDIKIEAIQTFSKIQFENEQDSSDAERYLDNFSEEREHESVTYRHEEALDEDLNVAVKAFSKTPKRNEPCPCGSGKKYKDCCAKSGPKKGLFAK |
4YS0 Chain:A ((2-802)) | --------ILFDKNKRILKKYAKMVSKINQIESDLRSKKNSELIRLSMVLKEKVNSFE-DADEH-----LFEAFALVREAARRTLGMRPFDVQVMGGIALHEGKVAEMKTGEGKTLAATMPIYLNALIGKGVHLVTVNDYLARRDALWMGPVYLFLGLRVGVINSLGKSYEVVWKNPDLARKAIEENWSVWPDGFNGEVLKEESMNKEAVEAFQVELKEITRKEAYLCDVTYGTNNEFGFDYLRDNLVLDYNDKVQRGHFYAIVDEADSVLIDEARTPLIISGPSKESPSVYRRFAQIAKKFVKDKDFTVDEKARTIILTEEGVAKAEKIIGVENLYDPGNVSLLYHLINALKALHLFKKDVDYVVMNGEVIIVDEFTGRLLPGRRYSGGLHQAIEAKEGVPIKEESITYATITFQNYFRMYEKLAGMTGTAKTEESEFVQVYGMEVVVIPTHKPMIRKDHDDLVFRTQKEKYEKIVEEIEKRYKKGQPVLVGTTSIEKSELLSSMLKKKGIPHQVLNAKYHEKEAEIVAKAGQKGMVTIATNMAGRGTDIKLGPGVAELGGLCIIGTERHESRRIDNQLRGRAGRQGDPGESIFFLSLEDDLLRIFGSEQIGKVMNILKIEEGQPIQHPMLSKLIENIQKKVEGINFSIRKTLMEMDDVLDKQRRAVYSLRDQILLEKDYDEYLKDIFEDVVSTRVEEFCSGKNWDIESLKNSLSFFPAGLFDLDEKQFSSSEELHD---------YLFNRLWEEYQRKKQEIGEDYRKVI-RFLMLRIIDDHWRRYLEEVEHVKEAVQLRS----DPIVEFKKETYYMFDEMMRRINDTIANYVLRVLEH----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YS0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157101 for 6107 contacts (-25.7/contact) +
2D Compatibility (PS) -80588 + (NN) -28741 + (LL) 6932
1D Compatibility (HY) -69600 + (ID) 19950
Total energy: -349048.0 ( -57.16 by residue)
QMean score : 0.444
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