Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRSNTLSSNNRPSSLGHFKNLIGFKGEVIIADINNPL-DLRRLEKLH--FDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNIVGSNESPENVYGFSKLCMDEFVLSHSSD---NVVGLRYFNVYGSREFYKEKTASMVLQLALSAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKSG---VYNVGYSQARSYNEIVSILKEHLGDF-KVSYIKNPYTFFQ----KHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
| 3LU1 Chain:A ((39-356)) | ----------KTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNF------STGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHI-----KYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149369 for 2515 contacts (-59.4/contact) +
2D Compatibility (PS) -31296 + (NN) -11443 + (LL) 1264
1D Compatibility (HY) -19200 + (ID) 4350
Total energy: -214394.0 ( -85.25 by residue)
QMean score : 0.517
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