Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILLTNDDGYHAKGIKALEQALENMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNV-FTKGYPLKGRKLLNVNVPNCSLQEYKGERITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLKWQKRENEDRLSDFDAIASNHASITPLNLDLTSYDDLKSLESWHEGMLK |
1J9K Chain:A ((2-242)) | --RILVTNDDGIQSKGIIVLAELLSEEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLAYNVVMDKRV-DLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAI----SSANYESP-DFEGAARFLIDFLKEFDFSLLDPF---TMLNINVPA---GEIKGWRFTRQSRRRWNDYFEERVSPFGEKYYWMMGEVIE----DDDRDDVDYKAVREGYVSITPIHPFLTNEQCLKKLREVYD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47246 for 2006 contacts (-23.6/contact) +
2D Compatibility (PS) -25250 + (NN) -249 + (LL) 1964
1D Compatibility (HY) -18000 + (ID) 4700
Total energy: -93481.0 ( -46.60 by residue)
QMean score : 0.359
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