Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVLHSHLENALNQLKELIDLTERDIRDIKLAKHAEIFERNHQKQLAIQAFEQEKTNIDAQMLSLKN-----------QFPNKEMSELLDEKTSDFLNQMREFLLVLKEKNLIYSRMAFAVSEFYSSLIQQIIPHDTCDYKGSRHVGSHFLRVQA |
1RT7 Chain:A ((450-530)) | --------------------------RETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIE-QLIKKEKVYLAWVPAH------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 33402 for 398 contacts (83.9/contact) +
2D Compatibility (PS) -6930 + (NN) 3536 + (LL) 5368
1D Compatibility (HY) 4800 + (ID) 300
Total energy: 39876.0 ( 100.19 by residue)
QMean score : -0.133
|
|
|