Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIFFIDNFDSFSYNLVYELECLGY--EVAVYQNDIDPSYLMGLMNEEPKTPLLFISPGPGNPNSSGN--LLKIIA----MAKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNEEDK-----------ILAYQFHPESIMTLQGRALLEQSVGFLRELS
3R74 Chain:A ((446-628))
-RALIVDAEDHFTAMIAQQLSSLGLATEVCGVHDAVDLA----------RYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREVPNQGIQVEIDL--------FGQRERVGFYNTYVAQTVRDEMDV----DGVGTVAISRDPRTGEVHALRGPTFSSMQFHAESVLTVDGPRILGEAITHAIR--
General information:
TITO was launched using:
RESULT:
Template:
3R74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97008 for 1229 contacts (-78.9/contact) +
2D Compatibility (PS) -17823 + (NN) -7818 + (LL) 1872
1D Compatibility (HY) -12800 + (ID) 2100
Total energy: -135677.0 ( -110.40 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_3R74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R74-query.scw
PDB file :
Tito_Scwrl_3R74.pdb
: