Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKISPSPRKLSKVSTSVSFLISFALYAIGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEPKEKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPKPKPEPKPKPEPKVEEPKKEEPKEEPKKEEAKEEAKEKSVPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSN---TTDILNHAALEAIKSAAHLFPKPDETVHLKIPIAYSLKED |
1J8B Chain:A ((41-81)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVKITINGAHNCRRIDIDPSLMEDDKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2979 for 181 contacts (-16.5/contact) +
2D Compatibility (PS) -4111 + (NN) -2236 + (LL) 10860
1D Compatibility (HY) -800 + (ID) 450
Total energy: 284.0 ( 1.57 by residue)
QMean score : 0.433
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