Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLFFEEWGPILWQGFLETLTMTGITLVISLAIGLPLGVFLTLTRKGGQSENLVAYSILNWVINILRSLPFIILLFLMIPVTRFV--V--------GTTIGIQGVIMPLVVFTAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVVIREARSGIVLGLTIATIGLIGATAMAGLVGA--GGLGTIAYQYGFQRFEPTVMYTTIIILIIMVQALQSFGNFLSRRLKKD
3D31 Chain:C ((77-283))
--------NRSVISSIFLSLYAGFLATLLALLLGAPTGYILARFD-------FPGKRLVESIIDVPVVVPHTVAGIALLTVFGSRGLIGEPLESYIQFRDALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYYPMVGPTLIYDRF-ISYGLSASRPIAVLLILVTLSIFLVIR---------
General information:
TITO was launched using:
RESULT:
Template:
3D31.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -225356 for 1523 contacts (-148.0/contact) +
2D Compatibility (PS) -19763 + (NN) 3267 + (LL) 1660
1D Compatibility (HY) -10000 + (ID) 1250
Total energy: -251442.0 ( -165.10 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_3D31.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D31-query.scw
PDB file :
Tito_Scwrl_3D31.pdb
: