Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKLKDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDE--VAAAAINTNFAMGAGLSINKDAIYHEPTK-DNPYPNVFVVRSANKDDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF |
4NTL Chain:A ((8-247)) | -----------------------------------EITVAVQLESSKDILEIAKKEAEKKGYKINIMEVSDNVAYNDAVQHDEADANFAQHQPFMEMFNKEKKADLVAVQPIYYFAGGFYSKEYQDAKDLPENAKVGIPSDPTNEGRALAILNANGVIKLKEGVGFNGTVADVVENPKNITFESIDLLNLAKAYDEKDIAMVFCYPAYLEPAGLT-TKDAILLEDKEASKHYALQVVTRKGEKDSEKIKVLKEAMTTKEVAEYIKKNSKGANIPAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64073 for 1955 contacts (-32.8/contact) +
2D Compatibility (PS) -25288 + (NN) -6247 + (LL) 2016
1D Compatibility (HY) -11200 + (ID) 3900
Total energy: -108692.0 ( -55.60 by residue)
QMean score : 0.516
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