Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKSERLNDMMLFLND---KNVFQLSDIMTKYDISRSTAIRDVKSLEEIGMPIYSERGRNGHYQVLRNRLLSPIVFNIDEVFALYFSMLTLKAYETTPFHLSVEKLKTKFERCLSAEKIEMLRKTEEVFSLGYIKHNNQCEFLDVILQFTMEEKVCQINYDKKGIEKTYVVQFYNISSAYGQWYVTSYNFETKRMQVFRCDRILELEENHAFEAKKLTDLKSETDYLYKKKDAINFEVEIASNGVDLFFKENYPSMKLNQEQGRNVIRGFYNRGEEPFIINYLLGFGDKINMVQPDSLKEMLLNELKSLQNHLQKLS |
1QBJ Chain:A ((10-70)) | ----DQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGK-LQKEAGTPPLWKIA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -29513 for 379 contacts (-77.9/contact) +
2D Compatibility (PS) -6145 + (NN) -641 + (LL) 19964
1D Compatibility (HY) 400 + (ID) 500
Total energy: -16435.0 ( -43.36 by residue)
QMean score : 0.600
|
|
|