Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGKKGVAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK
2EXD Chain:A ((72-145))
-----------------------RRETTDIGGGKYTFELKGKVGKVVKIAEDHYLVEVEGDKWIAYSDEK-LSLGDRVMVVDVDGLKLKVKRIPPQLE-
General information:
TITO was launched using:
RESULT:
Template:
2EXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14615 for 419 contacts (-34.9/contact) +
2D Compatibility (PS) -7721 + (NN) 2112 + (LL) 1332
1D Compatibility (HY) 0 + (ID) 600
Total energy: -19492.0 ( -46.52 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_2EXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EXD-query.scw
PDB file :
Tito_Scwrl_2EXD.pdb
: