Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSSIYGLTWTNLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQV-GCNIGCTFCASGLLKK-----SRDLTAGEIVEQIMNVQHYLD-------------GRNLEERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKK-NGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE |
| 2Z2U Chain:A ((49-289)) | ---------------------------------------------------------------------------------------------------THRCIQCTPSVIWCQQN-----------SQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAISLSGEPTLY-PYLDELIKIF-HKNGF-----TTFVVSNGILTD--VIEKIE-PTQLYISLDAYDLDSY----GGK-KEYWESILNTLDILKE-KK-RTCIRTTLIRGYN---DDILKFVELYERAD-VHFIELKSYM--------DMLQHDEILKLAKMLDENSSYKLI--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107466 for 1409 contacts (-76.3/contact) +
2D Compatibility (PS) -20640 + (NN) -8158 + (LL) 14496
1D Compatibility (HY) -10400 + (ID) 1450
Total energy: -133618.0 ( -94.83 by residue)
QMean score : 0.545
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