Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKNDDLLRERRKDEHVALGVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFYINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMILANVS----PEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYVKLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQA-YDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSLKKEGVTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGELAKWGTLREINLVKLANRK |
| 1VCG Chain:A ((9-270)) | ------------KHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMT------ERINLALAEAAEALGVGMMLGSGRILLERP--------VRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNPLQEAV-QRGDTDFRGLVERLAELLPL-PFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVR-EVLPHLPLVASGGVYTGTD------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73437 for 1899 contacts (-38.7/contact) +
2D Compatibility (PS) -26485 + (NN) -8718 + (LL) 9012
1D Compatibility (HY) -22400 + (ID) 4350
Total energy: -126378.0 ( -66.55 by residue)
QMean score : 0.383
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