Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKICGLKKAVDVAAAVENGADMIGFVFA-KSKRQVTVDEAHELAKNIPAGVKKVGVFVNPTEEELTAAIKGVPLDIVQLHGQEPAEQANRTDAEVI--KAFPVKDGKLPDNINDYPNAYILLDAPAEEYEGGSGKTFDWDKI--DRDLLTKNKLIIAGGLNAQNVQEAIKRFEPYAVDISSGVET-NGEKDPQKIKCFIKTAKGVE
1DL3 Chain:B ((4-203))
--VKICGITNLEDALFSVESGADYVGFVFYPKSKRYISPEDARRISVELP--VERVGVFVNEEPEKILDVASYVQLNAVQLHGEEPIELCRKIAERILVWKAVGVSNERDMERALNYREFPILLDTKT----------FDWSLILPYRDRF--RYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEAFPGKKDHDSIKMFIKNAKGL-
General information:
TITO was launched using:
RESULT:
Template:
1DL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99760 for 1501 contacts (-66.5/contact) +
2D Compatibility (PS) -20680 + (NN) -12622 + (LL) 580
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -153382.0 ( -102.19 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_1DL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DL3-query.scw
PDB file :
Tito_Scwrl_1DL3.pdb
: