Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LETWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAENFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSKFLILTTAGSLLWNTVLIGLGAMLGESWSEIVVFMDSFSTIIYSIIAILVVVGLGFFFRARFKKTLDEE |
| 2KJ4 Chain:B ((99-130)) | --------------------------------------------------------------------------GSVEKLT----ADAELQRLKNERHEEAELERLKSEY------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6285 for 125 contacts (50.3/contact) +
2D Compatibility (PS) -3539 + (NN) -1985 + (LL) 16964
1D Compatibility (HY) 1200 + (ID) 550
Total energy: 18375.0 ( 147.00 by residue)
QMean score : 0.022
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