Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEIKFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGDIYDSEDQ-SVRAQARFAKEMKRLEVANIPVFMIHGNHDF--IEKHKEKLALPSNVHVFSEQVEVMLHKTATGVSVNIYGFSYNE------------RHIRSSRIDEY--KVQGDADFHIALLHGSEVSSSEEHDVYAPFRV---QEISKKGFDYWALGHIHKRQLLAESPSIYYPGN-IQGRNRKESGEKGASIINLSEASTTIDFIGTSPIIWEEI-IIPLPKNSEINAFYREI-TNVLESYQGRSHSYFLHIIIQMASSQKINTNDWLQMLQEEVELSNTTFVWVHKLTTEITNRSNLQTWYESHLAGEEIRRSFEQLQDESAFYQSVEALYLESGANRYLDDLSEQERERLLENALMELGMTLAEVEGDEK |
| 3THN Chain:A ((1-291)) | ---MKILHTSDWHL-----GVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRM-MRTAPVVVLPGNQDWKGLKLFGNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA----GREIIINRALIPSVVDYAALGHIHSFREIQKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRG---------EPPRYERIDASPLPLKT---LYYKKIDTSALKSIRDSCRNF---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112543 for 2017 contacts (-55.8/contact) +
2D Compatibility (PS) -27838 + (NN) -9221 + (LL) 12440
1D Compatibility (HY) -15200 + (ID) 3600
Total energy: -155962.0 ( -77.32 by residue)
QMean score : 0.412
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