Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIV--------ILWLMSKGLGTDVKTFYTQAYKPGGDLIFWFLNPATIAFAVPLYKKNDVVKKYWVEILSSLVIGMIVSLMLIVAISKMVGLSQVGIASMLPQAAT-TAIALPITAAIGGNTAVTAMACILNAVIIYALGKKLVSFFHLNDSKIGAGLGLGTSGHTVGAAFALELGELQGAMAAIAVVVIG-------LVVDL------------------------VIPIFSHLIGLL---------- |
4P0P Chain:B ((62-389)) | --RMKAQRPEECLKHIIVVLDPVLLQMEGGGQLLGALQTMECRCVIEAQAVPCSVTWRRRAGPSEDREDWVEEP------TVLVLLRAEAFVSMIDNGKT----LQGFVTDITAKTAGKALSLVIVD--QEKCFVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAYPSPQLLVQAYQQCFSDKERQNLLADIQVRRTSRRIGPELSRRIYLQMTTLQPHLSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217366 for 1469 contacts (-148.0/contact) +
2D Compatibility (PS) -24177 + (NN) -3728 + (LL) 484
1D Compatibility (HY) -3600 + (ID) 1850
Total energy: -250237.0 ( -170.35 by residue)
QMean score : 0.188
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