Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLSIMAGVIAFVLTVIAIPRFIKFYQLKKIGGQQMHEDVKQHLAKAGTPTMGGTVFLIV--ALLVSLIFSIILSKENSGNLGATFGILSVVLIYGIIGFLDDFLKIFKQINEGLTPKQKMSLQLIAGLIFYFVHVLPSGTSAINIFGFYLEVGYLYAFFVLFWVVGFSNAVNLTDGIDGLASISVVISLITYGIIAYNQTQFDILLIIVIMIGALLGFFVFNHKPAKVFMGDVGSLALGAMLAAISIALRQEWTLLFIGFVYVFETSSVMLQVAYFKYTKKKTGVGKRIFRMTPFHHHLELGGVSGKGNKWSEWKVDAFLWAIGIFMSAITLAILYL- |
4ART Chain:A ((22-270)) | --------------------------IDATNDEEKLADIVENEIEKEIRKIENFYYYILRDGKIYPASDYDIEVEKGKRSANDIYAFVETDVT--------RDFDEFLFDIDYGLP-------------------------SISDILKFYLEKA------------GFRIANEVPTPN---------LKYYIHAVVEFPQ----YLAVNIYDIDSLARALRIPQIVEQKL-GNKPRTITADEFNDIERIVAEEQPIL-AGY-----TYDEALRIPYHYYVDHNNSFKDDALKIAHAYLQL-----------FPTPYQVCYEWKARWFNKIDCLKLERLK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ART.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212604 for 1796 contacts (-118.4/contact) +
2D Compatibility (PS) -25257 + (NN) -7592 + (LL) 9444
1D Compatibility (HY) -7200 + (ID) 1850
Total energy: -245059.0 ( -136.45 by residue)
QMean score : 0.109
|
|
|