Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKKIILSIATIAATASLAVSVQASEKVELKVATDSDTAPFTYQK-DGKFKGYDVDVVKAVFKGSKYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVK---DQSLNLSVSPLKGKIGNNKDGLEYLLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK
4KPT Chain:A ((29-247))--------------------------TV--KIASDSSYAPFEFQNGQKKWVGIDVDIMQEVAKINDWKLEMSYPGFDAALQNLKAGQVDGIIAGMTITDERKETFDFSNPYYTSALTIATTKDSKLSDYSDLKGKAV----GAKNGTAAQTWLQENQKKYGYTIKTYSDGVHMFAAL---SSGNIAGAMDEVPVISYAMKQGQDLAMNFPSISLPGGYG---------FAVMKGKNSTLVDGFNKALAEMKSNGDYDKILKKYGITA-------


General information:
TITO was launched using:
RESULT:

Template: 4KPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46970 for 1722 contacts (-27.3/contact) +
2D Compatibility (PS) -23133 + (NN) -8366 + (LL) 4184
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -88635.0 ( -51.47 by residue)
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_4KPT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KPT-query.scw
PDB file : Tito_Scwrl_4KPT.pdb: