Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFQFFLLVEAVVLVMGLMKILSDDWTSFIFILALILLALRFYNNDSRHNFLLTTSLLLLFLIFMLNPYIIAAVVFAVLYVLINHFSQVKKKNRYALIQFKNHQLDVKTTRNQWLGTDQH-ESDF-YDFEDINIIRISGTDTIDLTNVIVSGQDNVIIIQKVFGDTKVLVPLDVAVKADISSVYGSVQYFDFEEYDLRNES--IKLSQEEEYYLLKRVKLVVNTIAGKVEVSRK |
| 4DU1 Chain:A ((479-610)) | --------------------------------------------------------------------------------------FNQRKEHKGYMLAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLL----------INSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLNEVCGTEGEAFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7291 for 755 contacts (9.7/contact) +
2D Compatibility (PS) -12891 + (NN) -1841 + (LL) 10756
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -3085.0 ( -4.09 by residue)
QMean score : -0.001
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