Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYKTIKSDGIVEEEIKKSRFICHLKRVESEEEGRNYITQIKKAHYKANHSCSAMVIGEKGDIKRSSDDGEPSGTAGIPMLTVLEKQGLTNVVAVVTRYFGGIKLGAGGLIRAYSGSVANTIKEIGVVEVKEQIGIRIQLTYPQYQTFDNFLKEHHLQEFETEFL-EAVTCKIYVDPKEF-EHTITNLTEFYQGKALLTEEGSQIVEIPFKAETDK |
3CB4 Chain:D ((400-479)) | ---------------------------------------------------------------------------------------------------------------------------------REPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32024 for 541 contacts (-59.2/contact) +
2D Compatibility (PS) -8111 + (NN) 1457 + (LL) 8004
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -33074.0 ( -61.13 by residue)
QMean score : 0.372
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