Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKIIAVDLDGTLLHNNNT-ISDYTADTLRKVQAQGHKVIITTGRPYRMALAHYLRLDLK------TPMINFNGALTH-----------IPEKKWAFERSATIDKKLLLETL--------NLSDAIQADFIASEYRKNFYITMDNRDKINPQLFGVNEITDKMALDVTKITRNPNALLMQTRHKDKYELAKELRQHFNHELEV-DSWGGPLNILEFSPKGVNKAYALKHLLKSLNLSQENLIAFGDEHNDTEMLAFAHTGYAMKNANPTLLPYADQQIQWTNEEDGVAKTLEKLLL |
| 2B30 Chain:A ((28-297)) | ---KLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLK--------------------YRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHA---EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66040 for 2021 contacts (-32.7/contact) +
2D Compatibility (PS) -26345 + (NN) -14929 + (LL) 2164
1D Compatibility (HY) -13600 + (ID) 3150
Total energy: -121900.0 ( -60.32 by residue)
QMean score : 0.459
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