Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVKLFAIHLFFIVISFGIKYYHLQGPNLIWNMTLALIALDFAYLTSLFKKKILIGLFALAWFFFYPNTFYMLTDIIHMHFVGDVLYNKTNLILYILYVSSILFGFLSGIESFSVIMR-KFRISNIFLRW--GIIGIVSFVSSFGIHIGRYARLNSWDILTKPQVVINELLAVPSRDSFHFILGFTFLQVLCLIFMDYSAGKKLEK-------------------------------------------------------------------------------- |
| 4YHC Chain:A ((2-468)) | GWSDHDELSTDTTLHEEKFRIEPVPVHHQLDILKIAVSENYKTFASVGLDRSLVVWDLRQWCTKLVLSKEQMPRTLKAIALDPQGNYVSLFSKDTLFILNVESPSLMLQHSYHSKPNSKLNVFWMPGTHKDDEWKNFELVVVESSGEIQVFSLTIEIEGADIALVEKFQLSSPIIKSISIVSPTANRIASLTESGEVTVYSKKGP--VWSPKI--LSQNKNYLTE--TKKDIYGIAMADILFLARDSG---VDMIDL---------KNDELLHSFTLPPIKVNTFSVGVSNSRFVNGQFRVSSISFCFTHAVTEKVLYYYYGNESNESYIILNKWD--QQP-----NLVDVHDPDNSLASLTFDELQENIHEVEDASESVMSSDGLYIFGMRRKSSSGISGETQVWEVWMYSQSEKKHRSKSLKMYNSLIIADPGPSLAVSDRCVAIVLGNYVALVGYGSEIFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141658 for 1279 contacts (-110.8/contact) +
2D Compatibility (PS) -19170 + (NN) -433 + (LL) 2708
1D Compatibility (HY) -2800 + (ID) 2100
Total energy: -163453.0 ( -127.80 by residue)
QMean score : 0.207
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