Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------MKKLFNKRRSLFLTQNSKYLRYVFNDHFVLVLMFLSG-----FLLYQYSQLLKDFPKTHWPIIVIVS-------IIILMLLAMGGIASYLEPAD-----------KQFLLIKEEAIKEIINSAKKRTYIFWLVIQTLFLVLISPILIKLGL---SVFMITLLIFGLGIIKWLVITYKVKVFYNNQNLNWDA------------------AINHEQERKQSILKFFSLFTNVKGISTSVKRRSFLDGILKLISKTPSRLWTNLFVRAFLRSSDYLGLTIR-----------------LVTLNILSVIFVNETYLALALAFVFNYLLLFQLLALGHHFDYQYMNQLYPVRLNAKASQLKGFLRVLSYAVTVIDSIL---------IRELKPVILLIVLMLIVTEYYIPYKIKVSGKSF---------------------------- |
1DDZ Chain:A ((9-489)) | VMSDLEKKFIELEAKLVAQPAGQAMPGKSNIFANNEAWRQEMLKQDPEFFNRLANGQSPEYLWIGCADSRVPANQLLDLPAGEVFVHRNIANQCIHSDISFLSVLQYAVQYLKVKHILVCGHYGCGGAKAALGDSRLGLIDNWLRHIRDVRRMNAKYLDKCKDGDEELNRLIELNVLEQVHNVCATSIVQDAWDAGQELTVQGVVYGVGDGKLRDLGVVVNSSDDISKFYRTKSDSGALKAGNPNAPLVQVTKGGESELDSTMEKLTAELVQQTPGKLKEGANRVFVNNENWRQKMLKQDPQFFSNLAHTQTPEILWIGCADSRVPANQIINLPAGEVFVHRNIANQCIHSDMSFLSVLQYAVQYLKVKRVVVCGHY----ACGGCAAALGDSRLGLIDNWLRHIRDVRRHNQAELSRITDPKDSLNRLIEINVLEQMHNVCATSIVQDAWD-AGQELEVQGVVYGVGDGKLRDMGVVAKANDDIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -433419 for 2751 contacts (-157.5/contact) +
2D Compatibility (PS) -35545 + (NN) -3615 + (LL) 460
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: -478019.0 ( -173.76 by residue)
QMean score : 0.222
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