Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MQGLEIVMDIDTLEIYEVIDHDQEMSSDV--TEETADHISIQQVSQ--VTFYQMNLFDEMNLANTS--------------------------------------------------- |
| 3GGQ Chain:A ((6-149)) | SRPFSVLRANDVLWLSLTAAEYDQSTYGSSTGPVYVSDSVTLVNVATGAQAVARSLDWTKVTLDGRPLSTIQQHSKTFFVLPLRGKLSFWEAGTTKAGYPYNYNTTASDQLLVENAAGHRVAISTYTTSLGAGPVSISAVAVLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -417 for 234 contacts (-1.8/contact) +
2D Compatibility (PS) -6566 + (NN) 818 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -9915.0 ( -42.37 by residue)
QMean score : -0.065
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