Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------MDNKKLLITGKILLAILYIIVLFAVCVLAAMAFLSLFGSKLLDVDFFTLFLSDGIFKGGLML-----GIVFFLVVLDASI-------------------------------------------------------------------------------------------------------------------------------------------- |
| 4LXU Chain:A ((1-273)) | GHMIKICIAGKNNIAVNSLQFILKNYFEADQIVVIPNKNDKGIDSWQKSLLKFALDNNIKIVTLDEIYNIEQI-IFFSLEFDQIIKIENFKSDRLFNIHFSALPKYKGVFTSITPILNNELESGVTLHRIDNGIDTGNIIDQHCFPIDINDTARDLYFNYLKYGESIFKKNIQTIINNSYKDLKQTNINSSYFSRKDINLVHKINFKKTSFEIHNQIRAFIFQEYQLPIINNSKIIKSILANEFIGYNVFEEFENYFIISGIDGFKIIAQKLNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54979 for 384 contacts (-143.2/contact) +
2D Compatibility (PS) -7589 + (NN) 5403 + (LL) 204
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -61261.0 ( -159.53 by residue)
QMean score : 0.279
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