Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTETIYKLILKDGLRQIKFKNSHLKLVSSAEEGKRGAIFAYRSKANMIKARGLVLTSMEAVSENQDSFTHWTPNVYRYGSYSDSKRQITRGHSEDNLRQVNTFYIDFDITSSAEEMTSGDILTAAIDLGFMPTLILKSDKGYQAYFVLSEPAYVTSHSQFRVVKVAKAISQNLRNYFSQTLPVDMTCNHFGIARMPRTDNIEFFHADYTYSFQEWLDWSMKQSDIPFPSKKPNLTVISGSEGVKQVDEPWYGLLMREANIKGDKALMGRNNVLFTLALANFSSGVSQSDCEVVLADFNEHLAEPLSQDEFLKVIYSAYSGKYEAANRDYIKLLCKAWVNENLRNSDLFIKQRWYKFKKNRANRKNSHLHEWKADVMAYLEGYFQSDDPFIQTTKKAIREELNIPERSLDKVLKALKADNKIFFAVKSGRGGGIRLTSVKAIVLSLIQVKKERQEAYFANVAAFFEESLGFIKRVIEGVKSGLKQAKQLSLFEADIG |
1QBJ Chain:A ((12-69)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQRILKFLEELG-EGK---ATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEA--GTPPLWKIA------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22797 for 378 contacts (-60.3/contact) +
2D Compatibility (PS) -6496 + (NN) -4014 + (LL) 31332
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -6125.0 ( -16.20 by residue)
QMean score : 0.664
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