Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINDKNRYRGSLLAQSILKEKVTRTVTKDEMLETVNLDYRRLIIIQLVSIAFGGMAIWCLIALVLLTVVGILICSLHNDLPFVTAIPIESPIKMIWLEGWQI--NVAIGLIGTFGIFLDKWATNKMDALREATDKKQLTKDYLAWKEEHNG
2XZ3 Chain:A ((395-454))
------------------------------------------------------------------------INQTHYNLLNVASVVAQNRRGLDWLYIRLGFQSLCPTINEPCCFLRIQN--DSIIRLGDLQPLSQRVSTD---------
General information:
TITO was launched using:
RESULT:
Template:
2XZ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9164 for 258 contacts (-35.5/contact) +
2D Compatibility (PS) -5798 + (NN) 2624 + (LL) 8276
1D Compatibility (HY) -800 + (ID) 350
Total energy: -5212.0 ( -20.20 by residue)
QMean score : -0.227
(partial model without unconserved sides chains):
PDB file :
Tito_2XZ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XZ3-query.scw
PDB file :
Tito_Scwrl_2XZ3.pdb
: