Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFIPFKKSNKCVVTDELFLEVTWEDGKPPEDDSELLGIIEGLEQQYLDSFQHSIEESLPYMTFQQAELLFQSLKDAYGHFQLKKVAICHLEGKQAVSEGEVFASPFIIDSRYQNLLLPLIQSIMIGPDFQSYTYQEKREYFVNQIYPAYKVSLGIQESALPLFPEEGEQIPLDNTFVANRRVASIPTTSSEPRKPNSSFSLKKVYLLMGFLATLAAGAMVSSVSLHAELSKQQEQVNYLYQEWKDIQNLSDKEHQIDVFSRYFLPNYYSGKKENLSDFLSDGDAKY------TVP--------------KEGSLQSVILEKVTYDAKTKHYQLTYVLTIKAKEQLTSVRLEFEVKEQPSRKYGYVVTSEPKETPYLMKN |
| 3K7C Chain:A ((7-93)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNPEDLAKNFTKDLYSGDTKSVMSYIDLSEAKSDEEKTFVSDKITQVVAENAAKAKRMGGVKDIQIEEKTIN--KDSAKIRVLVLFNNDNNQSSNVFLAKKDRKWLVLLK---------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K7C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -22763 for 334 contacts (-68.2/contact) +
2D Compatibility (PS) -7152 + (NN) -800 + (LL) 20352
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -13613.0 ( -40.76 by residue)
QMean score : 0.573
|
|
|