Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEFIANGRVASIPDDAVGRTANGHVSFKFEFVCDSSQQDQEGK--GLPAFFHVQVYGKQAEIMAQSLSKGLPILIKGEIIQRPYTNQQGQRRTFQYISPSQHDGITFLESKEATKKRKQGRFTSQAVTSPTLAYSEPVDADEPF
2VW9 Chain:A ((2-109))
FNKVIMVGRLTRNV--ELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSL---QFMDKKS--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4923 for 761 contacts (6.5/contact) +
2D Compatibility (PS) -11604 + (NN) -1734 + (LL) 1516
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -11699.0 ( -15.37 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_2VW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VW9-query.scw
PDB file :
Tito_Scwrl_2VW9.pdb
: