Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDEKYGVPRDIYAKVKIIGLVIADIVFVGGSAVAALSIGTRIFPTNQWPQLVAFMILTPLMCLYLVLPTNGGKKNWHSMFLFFRRRRKRYISLNYQRRENR-
2JXF Chain:A ((1-30))
------------------------------------------------------------------------QTNWQKLEVFWAKHMWNFISGIQYLAGLST
General information:
TITO was launched using:
RESULT:
Template:
2JXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2085 for 114 contacts (18.3/contact) +
2D Compatibility (PS) -3244 + (NN) -1696 + (LL) 5544
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 839.0 ( 7.36 by residue)
QMean score : 0.106
(partial model without unconserved sides chains):
PDB file :
Tito_2JXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JXF-query.scw
PDB file :
Tito_Scwrl_2JXF.pdb
: