Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESET---TDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANH--LTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
4BJN Chain:A ((23-116)) | --------------------------------------KMKFLKPDQVQKLSTDDLITYMAEKDKNVRDLAIKLRDAKQDST---TPEIKQTYDKAYEKTKAAAEKLVSEESLTRDALLKLTEEQYVEKAALFDKDVYRNNLKRQTYEKLLRSETDVLYREVARIFIAREGEPALTAKIERLALTLENNADTRSKPIDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20612 for 472 contacts (43.7/contact) +
2D Compatibility (PS) -9161 + (NN) -1281 + (LL) 3856
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: 10226.0 ( 21.67 by residue)
QMean score : 0.241
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