Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANHRIDRVGMEIKREVNEILRLRVNDPRVQDVTITDVQMLGDLSMAKVFYTIHSTLASDNQKAQIGLE-KA--TGTIKRELGKNLTMYKIP-DLQFVKDESIEYGNKIDEMLRNLDKKD
4WHJ Chain:A ((137-214))
-----------------HELISLEITSPEVPDLTIIDLPGI-------------T-------PRDIGLQIKALIKKYIQRQQTINLVV--VPCNVDIATTEALSMAHEVDPEGDRTIGIL
General information:
TITO was launched using:
RESULT:
Template:
4WHJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6512 for 291 contacts (22.4/contact) +
2D Compatibility (PS) -6820 + (NN) -296 + (LL) 3136
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -5268.0 ( -18.10 by residue)
QMean score : 0.234
(partial model without unconserved sides chains):
PDB file :
Tito_4WHJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WHJ-query.scw
PDB file :
Tito_Scwrl_4WHJ.pdb
: