Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPSFKKLLLLFSIITILSIACTPHAKASGRSWKSWFIEQYFWLKRDKSYYKVQDESSFQKYLNASREQSDKGYYLDPNSVNGGLVQERLFDMQVYSWNDNGKANQKTIFYLAGGSYLNNPTPYHISMLKTLSTSLDAKIILPIYPKTPRYTYDYAIPRLVNLYR----HFHEKNANLTLMGDSAGGGLALGLAHALSHQSGQEAIPQPKNIILLSPWLDVTMKHPEIPKYEDTDPILSAWGLARVGEIWANGSNNTNHTYVSPKNAPATKLAPITLFTGTREIFFPDIRDYAAQLQAANHPVNYIAQEGMNHVY----PIYPIEEAKTAQYQMIDIINKTP |
4XVC Chain:A ((84-314)) | -----------------------------------------------------------------------------------------------------GARDDQVFLYLHGGGYVIGSMRTHRVMLSHIARAAGCRVLGLDYRLAPETPFPAPVEDTVAAYRWLLAHGYDPS-RIALGGDSAGGGLVVAALVALRYIGE----PLPAAGVCLSPWIDMEATGESFTTNATMDPSVNKERVMSIAALYLGG-KNPQAPLASPLYADLQGLPPLLVQVGGIETLLDDARALTTRAKAAGVDADLEVWDDMPHVWQHFAPILP--EGKQAIARIGEFLRKQI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120558 for 1985 contacts (-60.7/contact) +
2D Compatibility (PS) -23834 + (NN) -12429 + (LL) 7648
1D Compatibility (HY) -9200 + (ID) 2900
Total energy: -161273.0 ( -81.25 by residue)
QMean score : 0.565
|
|
|