Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRKIIGLTLLSLSVLTLTACGNRSDKSANKSDIKVAMVTNQGGVDDKSFNQSAWEGLQKWGKKKGLTKGNGFDYFQSS-NESDHANNLDTAASSGYNLIFGIGFGLHD-TIEKVSENNKDVKYVIVDDIIKGKENVASVTFADNEAAYLAGVAAAKTTKTKTVGFIGGMEG-V-VVKRFEAGFKAGVKSIDPAIKVAVSYAGSFTDAAKGKTIAATQYA--TGVDVIYQAAGGTGAGIFSEAKTENETRKESNKVWVIGVDRDQSQEGNYVSKDGKKANFVLASTIKEVGKSLQSVAELTEKKQYPGGKVTVFGLKDSGVDIKEHQLSSEGSVAVKKAKEDIVSGKIQVPMK |
| 2FEP Chain:A ((16-264)) | --------------------------------TTTVGVII-P-D-ISSIFYSELARGIEDIATMYKYN----IILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEF--KRSPVPIVLAASVEE-QEETPSVAIDYEQAIYDAVKLLVDKG-HTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYT-YDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLS--IPEDLDIIGFDNTRLSLM---------VRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHRIELRKSTK------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -57072 for 2087 contacts (-27.3/contact) +
2D Compatibility (PS) -26478 + (NN) -11364 + (LL) 2664
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -101250.0 ( -48.51 by residue)
QMean score : 0.420
|
|
|