Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQKSNYFKGQIDYAVVIPVFFLLMIGLASIYVATMNDYPSNIYIAMFQQVSWIIM--------GCIIAFVV-------MLFSTEFLWKATPYLYALGLTLMVLPLIFYSPQLFAATGAKNWVTIGSVTLFQPSEFMKISYILMLSRITVSFHQKNRKTFQDDWKLLG-------LFGLVTLPVMILLMLQKDLGTAL---------VFLAILSGLIL---------LSGISWWIILPILST-IVLFIASFLMIFISPNGK-----EWF----YNLGMDTYQINRLSAWIDPFSFADSIAYQQTQGMV----SIGSGGVTGKGFNILELSVPVRESDM---IFTVIAENFGFIGSAIV----------LGLYLII------------IYRMLRITIESNNQFYTFI-STGFIMMIV---FHVFENIGAAVGILPLTGIPLPFISQGGSSLLSNLIGIGLVLSMSYQNTVRQAKANGSHLKYRSI---------------------------------- |
| 2I3O Chain:D ((2-516)) | FRSRPN--------ALSQRSVIASSSELASLAGRDILKRGGNIFDAALAVSALCVTQNNLCGLGGDLFALIRDENGQIDLNGSGQASRAVSIDYYESGLTKIPERGPYAAITVPGIAGS--WDEIFRKFATDIADILEPAIRTASAGFPIT--QNYSDSIARSAPVIGQYRGWSSIFPNGSVPVAGEILKQPDLAESFRLSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTDLDEFRIYETSPNSQGITVIEWIRGESHGYDSRTWEAKIEDIFETEEAYDKRRKITDPSYNIAQHDSANGKGLPKRDHNDIGDTTYFSISDSEGRSVSIIQSNYGF-GSGIVPKGTGFVLQNRGSYFTLQRDHPNALPGKRTFHTLAACVEKEHDLYASLGSGGDIQPQVQQILEILKDNTDPQAILDKPRWTEPY------TIYEAPGAVYVESEELYRNVSKQI--SGRKVVLRDVSQEFGTAQITTLIRGDVVVGAADPRGDGIAIPYS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2I3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -386832 for 2891 contacts (-133.8/contact) +
2D Compatibility (PS) -38498 + (NN) 15579 + (LL) 952
1D Compatibility (HY) -4800 + (ID) 3400
Total energy: -416999.0 ( -144.24 by residue)
QMean score : 0.124
|
|
|