Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKQFIKLGIATLLTVISLYTPINLATNHTTENIVTAQEYKTKENGTLPFKHKRQ-LVLGE-----LDDKGRATFAHIQLKVKDEPKKKRVKRLKTTPVGWHNFKFYYNDGTQKAWLMSRGRLICHQFSGL-------NNERKNLVPMTNWLNTGNYNSTNSSNPESMLFYEKQLKTWLSTHKNYYLDYKVTPIYQNN-ELIPRKIELKYVGIDKTGKLLPIFIGNKSTQDQFGISTVTLENTSPNATIDYLSGKAQNTVLSAKEQRKLIAKHEEEKRLAEKKVEEEKAAAETQKKLEEEQARLAAEAQRKQKEEQARLAAETQKKQETLVQEQTSQGYKRDYRGRWHRPNGQYASKAEIAAAGLQW |
| 3OWV Chain:A ((49-247)) | --------------------------------------SGAFIVNGNKTNLDAKVSSKPYADNKTKTVGKETVPTVANALLSKATRQY-------SWTPPGWHQVKNLK--G-SYTHAVDRGALLGYALIGGLDGFDASTSNPKNIAVQTAWANQAQA-----EYSTGQNYYESKVRKALDQ--NKRVRYRVTLYYASNEDLVPSASQIEAKSSDGE---LE--------------FNVLVPNVQKGLQLDYRTGEVTVTQ----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13716 for 1411 contacts (-9.7/contact) +
2D Compatibility (PS) -18616 + (NN) -7082 + (LL) 14904
1D Compatibility (HY) -1600 + (ID) 1950
Total energy: -28060.0 ( -19.89 by residue)
QMean score : 0.382
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