Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKKNKVFLGVLLVLVVILGGGVLFYQSQFQKTTNQALAIAYKDAKVAKKDVIHQKIDKEFENFRGSYEIEFNTKSAEYSYHVDAKTGQILERDMDNNGFSKSTSQSSSSSSQKSHKISQEEAKKIAFKDANIEESEVSNLKIKEEI-----ENGKSVYDIDFVDLKNKNEVDYQIDAETGKIIERSRDHMND |
2P3U Chain:B ((15-112)) | ----------------------------------------------------------------------------------------QALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 52134 for 592 contacts (88.1/contact) +
2D Compatibility (PS) -9432 + (NN) 2164 + (LL) 7168
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: 48884.0 ( 82.57 by residue)
QMean score : -0.014
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