Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDIKILALDLDGTLFTTD-KKVSEENKVALKAAREKGIKVVITTGRPLKAIGNLLEDLELVSDEDYSITFNGGLVQQNTGKILAKTAMT----RQEVEDIHEELYQVGLPTDILSEG--------TVYSIANKGHHSQYHLANPLLEFIEVDDLEQVPKDVVYNKIVSVIDATYLDQQIAKLPDRLKVDYEMFKSRDIILELMPKGVHKAVGLELLTKHLGLDSSQVMAMGDEANDLSMLEWAGLGVAMANGIPEAKAIAKATTICNNDESGVAEAIGKYILSEEN |
| 3R4C Chain:A ((12-265)) | ---IKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRA----ASDLHEIDAVP-YDGVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALE---LNEGVFVNRLTPTVEQIAGIVEH-------PVPPVVDIEEM--------FERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTD-TVDNSGLYKALKHFGVI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80807 for 2005 contacts (-40.3/contact) +
2D Compatibility (PS) -26192 + (NN) -13977 + (LL) 2320
1D Compatibility (HY) -14800 + (ID) 3850
Total energy: -137306.0 ( -68.48 by residue)
QMean score : 0.508
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